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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7175929 chr15:31035104 T/A CHRNA7 chr15:32215641-32465219:+ 0.31 7.19 2.58E-12 Box Plot
THCA rs7177350 chr15:30974606 G/A CHRNA7 chr15:32215641-32465219:+ 0.42 8.98 6.27E-18 Box Plot
THCA rs7178789 chr15:30953716 G/A CHRNA7 chr15:32215641-32465219:+ 0.28 6.64 8.32E-11 Box Plot
THCA rs7180859 chr15:31041555 A/G CHRNA7 chr15:32215641-32465219:+ 0.31 7.08 5.2E-12 Box Plot
THCA rs7181145 chr15:30953906 A/G CHRNA7 chr15:32215641-32465219:+ 0.29 6.88 1.89E-11 Box Plot
THCA rs71828559 chr10:51806065 ATTC/A FAM21B chr10:47894023-47949412:+ 0.49 7.88 2.17E-14 Box Plot
THCA rs71834654 chr11:77580548 ACGGT/A INTS4L1 chr7:64601603-64694600:+ 0.43 7.81 3.72E-14 Box Plot
THCA rs718364 chr14:39909547 A/G LOC647288 chr13:75811890-75814517:- -0.53 -10.88 9.0E-25 Box Plot
THCA rs7186307 chr16:20477165 A/C ZMYND12 chr1:42896000-42921938:- 0.26 5.91 6.68E-9 Box Plot
THCA rs7186541 chr16:30334923 G/A NPIPL3 chr16:21413451-21458484:- 0.2 6.2 1.24E-9 Box Plot
THCA rs7186805 chr16:20477163 G/C ZMYND12 chr1:42896000-42921938:- 0.26 5.91 6.68E-9 Box Plot
THCA rs71881107 chr6:26759130 CTATTTATT/C ZFP57 chr6:29640169-29648887:- 0.76 7.07 5.38E-12 Box Plot
THCA rs71934146 chr2:132273426 GGAGTC/G CCDC74B chr2:130896860-130902707:- 0.39 6.88 1.84E-11 Box Plot
THCA rs7193826 chr16:20478582 C/T ZMYND12 chr1:42896000-42921938:- 0.26 5.87 7.94E-9 Box Plot
THCA rs7195216 chr16:30336030 A/T NPIPL3 chr16:21413451-21458484:- 0.2 6.2 1.24E-9 Box Plot